Damien George b63be37be1 stmhal: In safe mode, still mount SD card and present as MSD over USB.
It's still "safe" because no scripts are run.  Remove the SD card if you
want to access the internal flash filesystem.  Addresses issue #616.

Also: remove obsolete pyb.source_dir setting, and reset pyb.main and
pyb.usb_mode settings on soft-reset.
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